------- SECIS element -- id:1 -- grade:A ---- Chromosome = OMLM01003366.1:subseq_0,103768_ Strand = - Positions = 35050 - 34979 Found by: Infernal (score=41.95) Covels (score=41.09) Stem2 length = 9 Apical loop length = 17 Insertion in stem2 = 0, 0 Free Energy = -22.13 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc (({((((((---....{[[{({((((((((.................))))))))})}]]}..--..-.))))))})) target GUUGGCCAG---CUAAUGAUGACCUGCACUAAAACCCAAAACUGGGGAGUGCAGGCCUGAUGU--CA-CCUGGUCUGC **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = OMLM01003366.1:subseq_0,103768_ Strand = + Positions = 9444 - 9517 Found by: Infernal (score=10.33) Covels (score=10.27) Stem2 length = 9 Apical loop length = 14 Insertion in stem2 = 0, 1 Free Energy = -18.94 ..(((((((.......(((((((((((((((...............))))))))).))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccagg-cCuGAUGuuuuuucaugaccggc ..((((({(((((((.{[[(({((((((((......---........)))))))).}))]]}))--)))))}))))).. target CAUAACUAUAGAAUCAUGACCACUAGAGUGAAAAUC---UUAACAGCUACUCUAGCAGGGAUGG--UUCUACAGUUACC **** ^^^ ****